Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885804.1_cds_XP_016439903.1_35413
CDS Infomation

[gene=LOC107765736] [db_xref=GeneID:107765736] [protein=probable pectinesterase/pectinesterase inhibitor 59] [protein_id=XP_016439903.1] [location=join(87431..88328,90486..91180)] [gbkey=CDS]
Sequence

ATGACAATTTATAAGTTCAATTCTTTACTCCTTTTGTTCTTTTCTCTATCTTTGTCCCTA
CATCAATCTTTATCAATTGATGAAGAAACAAGTAATGACATTAACTGGTGGTGTAGCAAA
ACTCCTCACCCCGAGCCATGTAAATACTTCATGTCCGGAGATTCTTTCAAACCCCAGAAC
AAATCCGAATTTCGAACTATGACAGTCCAAGTTGCTTTAGATCACGTAATTCAAGTACAG
GCCCATGCAAAAAATGTAAGCCAACATTGCAGGGGAAAACGTAAGCAGTTAGTATGGATG
GATTGTGACAAGCTAATGGATGATACAGTTCTCCAATTAAACCGTAGTCTTGACGGCATT
AAATCAAATTCAAGTTCAGATTTTGATGCTCAAACTTGGCTTAGTGCCTCAATGACAAAC
ATTGAAACATGTTTATCGGGATCAAATGATCTTAACGTATCCAATATCTTACAGCCGAAT
TTGTCTACTAATGTTTCGCAGCTGATTAGTAACTGTTTGGCTATGAATGGGGAGTTCGTG
GACTGGGAAAATACAACACAAGTTGGTGGATTTCCAAATTGGCTCACGGCTAGTGAAAGA
GTGTTGTTACATTCCTCGTCGATAGATTTGATGGCTACGAGGGCTAATTATGTGGTGGCT
AAGGATAGATCGGGTCATTTTCGGTCTATTCAGGCTGCAATTAATTATGCAACTTCAAGA
AGAGTTGGAAATCAGAGGATTGTGATATATATAAAAAGGGGTGTTTATAGGGAGAATATA
TTGATAGGTCCTACTATGGGAAAGATTATGTTAGTTGGTGCTGGCTTGAGATACACTGTA
ATCACGGGCAGCCGCAGTGTTGCTGCAGGTTACACAACTTACAGTACTGCAACTCTTGGG
GTGGACGGAATTGGATTCATTGCTCGAGGCATGACATTCAGAAACACAGCAGGGCCACAA
AATGGCCAAGCAGTAGCTCTCCGATCCGCATCTGATCTTTCAGTGTTCTACGGCTGTGGT
TTCGAAGGATACCAAGATACCCTCTTTGTCCAATCCCAACGACAGTTCTACAAATCATGT
TATATCTACGGCACCATAGACTTCATCTTCGGCAACGCCGCAGTTGTTTTCCAAAATTGC
ATGATTTACGTCCGAAGACCCTTATGGGGTCAAGTGAACGTGATCACAGCACAAGGCAGA
AACGACCCTTTTCAGAACACTGCAATTTCAATTCATAACTCTCGGATAATGGCAGCACCT
GATCTTCGGCCCGTGGTTCGGTCGTTTCAGACATATTTGGGACGTCCGTGGCAGCAATAT
TCAAGAACGGTTATAATGAAGACTTATATTGACAGTTTGGTAAATCGAGCAGGTTGGTTA
ACTTGGTTAGATTCTAATTTTGCGTTGAGCACTTTGTACTATGCGGAATATGGTAATATT
GGACCAGCGGCTTCGACAAGGTATAGGGTAAAGTGGCCTGGTTATCATGTGATAAAGAGT
GGGAATGTTGCTTCGAAATATACTGTTGCTAGCCTTATTGCTGGAAGGGCATGGCTGCCT
TCTACTGGTGTGCCATTCACTGCGGGGCTCTAA

Peptide Sequence

PEP ID

XP_016439903.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 59 [Nicotiana tabacum]
Sequence

MTIYKFNSLLLLFFSLSLSLHQSLSIDEETSNDINWWCSKTPHPEPCKYFMSGDSFKPQN
KSEFRTMTVQVALDHVIQVQAHAKNVSQHCRGKRKQLVWMDCDKLMDDTVLQLNRSLDGI
KSNSSSDFDAQTWLSASMTNIETCLSGSNDLNVSNILQPNLSTNVSQLISNCLAMNGEFV
DWENTTQVGGFPNWLTASERVLLHSSSIDLMATRANYVVAKDRSGHFRSIQAAINYATSR
RVGNQRIVIYIKRGVYRENILIGPTMGKIMLVGAGLRYTVITGSRSVAAGYTTYSTATLG
VDGIGFIARGMTFRNTAGPQNGQAVALRSASDLSVFYGCGFEGYQDTLFVQSQRQFYKSC
YIYGTIDFIFGNAAVVFQNCMIYVRRPLWGQVNVITAQGRNDPFQNTAISIHNSRIMAAP
DLRPVVRSFQTYLGRPWQQYSRTVIMKTYIDSLVNRAGWLTWLDSNFALSTLYYAEYGNI
GPAASTRYRVKWPGYHVIKSGNVASKYTVASLIAGRAWLPSTGVPFTAGL

Transcript Sequence

Gene sequence data has not been registered.